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Innovate with Custom NGS Panels

Submit a design online and get your custom NGS panel in 2 weeks!


CleanPlex® Custom NGS Panels are designed and optimized by our expert scientists to meet the desired specifications using Paragon Genomics’ proprietary ParagonDesigner algorithm. Powered by our patented CleanPlex technology, as many as 20,000+ amplicons per primer pool can be multiplexed in a single reaction to create small to large panels for any applications and for either Illumina® or Ion Torrent platforms. In addition, amplicon size can be tailored according to input DNA fragment size to generate optimal performance for all sample types. High quality target-enriched NGS libraries are generated in just 3 hours using a streamlined, 3-step workflow, allowing researchers and assay developers to discover more with less.


Get Started Quickly with Ready-to-Use NGS Panels

Fast and accurate analysis using pre-designed and pre-optimized panels


Our Ready-to-Use NGS Panels are designed and optimized using content from peer-reviewed publications and expert input. These pre-optimized panels target the most important and meaningful variants in the area of interest. All panels feature a simple, streamlined, three-step protocol that can be completed in just a few hours, allowing you to get to results faster!

Trusted by Researchers and Assay Developers

Organizations, large and small, are expanding their genomics capabilities with CleanPlex

When we decided to choose a sequencing platform, we had several choices and I am delighted that we chose Paragon Genomics. Paragon Genomics has enabled us to move our sequencing in-house with an affordable and easy-to-use product. They assisted us every step along the way from choosing the amplicons, to guiding us through library preparation to assisting with analysis. I strongly recommend their CleanPlex® amplicon-based targeted sequencing approach and could not be happier with their product.

Elliot Stieglitz, MD, Assistant Professor, University of California San Francisco

Sign Up for Product and Event Updates

Upcoming Events

Meet us at upcoming events and learn how we can help you discover MORE with lessTM 

January 12 – 16, 2019, San Diego, CA
Booth 425

PMWC 2019
January 21 – 23, 2019, Santa Clara, CA
Booth 225
Talk by Tao Chen, CEO & Co-founder during Liquid Biopsy Showcase (Day1)