Useful Tools

Material Description
Sample Multiplexing Calculator for IlluminaDetermine how many samples can be sequenced on various Illumina sequencing platforms based on desired sequencing depth and panel size.
Illumina Index Sequence and Example Sample SheetsExcel file of all the index sequences offered by Paragon Genomics. Additional information and example of Illumina Sample Sheet.
Ion Torrent Index sequence and Plate MapIon Torrent index sequence information
MGI Index sequence and Plate MapMGI index sequence information
Illumina Data Analysis Guidelines

Instructions to set up run parameters for sequencing using DNA Amplicon Module on Local Run Manager (LRM) for Illumina sequencers

CleanPlex® Infectious Disease Research NGS Kits

CleanPlex® Oncology NGS Kits

CleanPlex Oncology NGS Panel                                        Download Last Updated
BRCA1 & BRCA2 Kit
Discontinued
Product Sheet
Discontinued
 

 

 User Guide

 

 

   Quick Guide

 

 

  BED Files are available through My Downloads after purchase

April 2023
 BRCA1 & BRCA2 Kit v3Product Sheet
TP53 KitProduct Sheet
OncoZoom® Cancer HotSpot KitProduct Sheet
Hereditary Cancer Kit v2Product SheetUser Guide  Quick GuideBed Files are available through My Downloads after purchase
March 2024
Comprehensive Hereditary Cancer PanelProduct SheetUser GuideN/ABed Files are available through My Downloads after purchaseMay 2024
TMB 500 KitProduct SheetUser Guide Bed Files are available through My Downloads after purchaseDecember 2021

CleanPlex® Inherited Disease NGS Kits

CleanPlex NGS Panel                                        Download Last Updated
Mitochondrial Disease KitProduct Sheet 

  User Guide

 

   Quick Guide

 

 BED Files are available through My Downloads after purchase

 

January 2021

CFTR KitProduct Sheet  

CleanPlex® Ready-to-Use and Custom NGS Panels

CleanPlex NGS Panel                                        Download Last Updated
Ready-to-Use NGS PanelsBrochure 

User Guide

  

Quick Guide

  

 BED Files are available through My Downloads after purchase

 

January 2021

Custom NGS PanelsBrochure

AgriType® Custom NGS Kits for Agrigenomics

AgriType AgriGenomics NGS Panel                                        Download Last Updated
AgriType Auto (High-throughput applications)BrochureUser Guide AGBT Ag Poster    BED Files are available through My Downloads after purchase

 

May 2023

AgriType Prime Product Portfolio BrochureUser Guide coming soon May 2023

CleanPlex® RNA Ready-to-Use and Custom NGS Kits

Fusion Discovery and Detection Panels Download
Last Updated
OmniFusion RNA Lung Cancer KitProduct SheetBED Files are available through My Downloads after purchase

User GuideSeptember 2020
AccuFusion RNA Lung Cancer KitProduct SheetUser GuideOctober 2022
Custom RNA Panel Kit n/aUser GuideDecember 2023

CleanPlex® UMI Ready-to-Use NGS Kits

CleanPlex UMI NGS Panel                                      Download  Last Updated
CleanPlex UMI Lung Cancer KitProduct SheetUser Guide

Quick Guide

BED Files are available through My Downloads after purchase

April 2024
CleanPlex Custom UMI Kitn/aApril 2024 

CleanPlex® Indexed PCR Primers

CleanPlex® for MGI Ready-to-Use, Singular, and Custom NGS Kits

CleanPlex for NGS Panels Download 
CleanPlex for MGI
BRCA1 & BRCA2 Kit
Product SheetUser GuideNovember 2021
CleanPlex for MGI
OncoZoom® Cancer HotSpot Kit
Product Sheet
Ready-to-Use NGS KitsBrochure
Custom NGS PanelsBrochure
Singular Addendum (UG supplement) AddendumDecember 2023